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University of Chicago

BSD Microscopy Core Facilities

mpe1

 

2007

zebracropd

On the cover for a recent issue of Development with a composite image of
zebrafish provided by Ru Yi Teow was done at the Anatomy Confocal Facility by Isaac Skromne, a post-doc
in Robert Ho's lab; the web link is http://dev.biologists.org/content/vol134/issue11/cover.shtml

"Confocal image of an isl1-GFP zebrafish embryo injected with morpholinos to block cdx1a and cdx4 translation. Anterior is to the left. The image shows the expansion of isl1-GFP-expressing hindbrain branchiomotor neurons (green) throughout the trunk and tail nervous system of a cdx1a/cdx4-deficient zebrafish embryo. Somites (red) were stained with an anti-myosin antibody." Development .

 

First published online May 16, 2007
Development 134, 2147-2158 (2007)
Repression of the hindbrain developmental program by Cdx factors is required for the specification of the vertebrate spinal cord
Isaac Skromne*, Dean Thorsen, Melina Hale, Victoria E. Prince and Robert K. Ho. Department of Organismal Biology and Anatomy, The University of Chicago, 1027 E. 57th Street R107, Chicago, IL 60637, USA.

 

 

2006ravi

Ravi Palanivelu and Daphne Preuss. (2006) Distinct short-range ovule signals attract or repel Arabidopsis thaliana pollen tubes in Vitro. BMC Plant Biology 2006, 6:7

2006

Lo JC, BAsak S, James ES, Quiambo RS, Kinsella MC, Alegre ML, Weih F, Franzoso G, Hoffmann A, Fu YX. Coordination between NF-kappaB family members p50 and p52 is essential for mediating LTbetaR signals inthe development and organization of secondary lymphoid tissues. Blood. 107(3);1048-55.2006

Sagiv Y, Hudspeth K, Mattner J, Schrantz N, Stern RK, Zhou D, Savage PB, Teyton L, Bendelac A. Cutting edge; impaired glycosphingolipid trafficking and NKT cell development in mice lacking Niemann-Pick type C1 protein. J Immunol. 177 (1);26-30.2006

Gemel J, Lin X, Veenstra RD, Beyer EC. N-terminal residues in Cx43 and Cx40 determine physiological properties of gap junction channels, but do not influence heteromeric assembly with each other or with Cx26. J Cell Sci. 119(Pt11);2258-68.2006

G.D. Ghadge, L. Wang, K. Sharma, A.L. Monti, V. Bindokas, F. J. Stevens, and R.P. Roos. Truncated Wild Type SOD1 and FALS linked Mutant SOD1 Cause Neural Cell Death in the Chicak Embryo Spinal Cord. Neurobiology of Disease 21;194-205.2006

M. Hara, R. F. Dizon, B.S. Glick, C.S. Lee, K.H. Kaestner, D. W. Piston, and V. P. Bindokas. Imaging Pancreatic Cells in the Pancreas. Am J Physiol Endocrinol Metab. 290 (5); E1041-7.2006

R. Jagadeeswaran, P.C. Ma, T.Y. Seiwert, S. Jagadeeswaran, O. Zumba, V. Nallasura, S. Ahmed, R. Filiberti, M. Paganuzzi, R. Puntoni, R.A. Kratzke, G. J. Gordon, D. J. Sugarbaker, R. Bueno, V. Janamanchi, V. P. Bindokas, H.L. Kindler, and R. Salgia. Functional Analysis of c-Met/Hepataocyte Growth Factor Pathway in Malignant Pleural Mesothelioma. Cancer Res 66;352-361.2006

S. Roth, J.C. Dreixler, A. R. Shaikh, K. H. Lee, V. Bindokas. Mitochondrial Potassium ATP Channels and Retinal Ischemic Preconditioning. Invest Opthalmol Vis Sci. 47;2114-2124.2006

M.W. Roe, J.F. Fiekers, L.H. Philipson, V. P. Bindokas. Visualizing calcium signaling in cells by digitized wide field and confocal fluorescent microscopy. Mehtods Mol Biol. 319:37-66.2006

Di A., Brown M. E., Deriy L.V. Li C., Szeto F. L., Chen Y., Huang P., Tong, J., Naren, A.P., Bindokas ,V. Palfrey H.C.,Nelson D.J. CFTR regulates phagosome acidification in macrophages and alters bactericidal activiy. Nat Cell Biol. 8:933-944.2006

Wang, X Q, Deriy, LV, Foss, S, Huang, P, Lamb, FS, Kaetzel, MA, Bindokas, V, Marks, JD, Nelson, DJ. CIC3 channels modulate excitatory synaptic transmission in hippocampal neurons. Neuron 52;321-333.2006

R. Jagadeeswaran, H. Surawska, S. Krishnaswamy, V. Janamanchi, A.C. Mackinnon, T. Y. Sweiwert, S. Loganathan, R. Kanteti, T. Reichman, V. Nallasura, S. Schwartz, Y.C. Wang, L. Girard, M. S. Tretiakova, L.E. martin, A. Acurio, S. Ahmed, O. Zumba, L. Soulii, V. P. Bindokas, L. Szeto, G. Gordon, R. Bueno, D. Sugarbaker, M. W. Lingen, M. Sattler, T. Krausz, V. Natarajan, J. Minna, E.E. Vokes, M. K. Ferguson, A.N. Husain and R. Salgia. The focal adhesion protein paxillin is a target for somatic mutations in lung cancer -implications for enhanced cell survival and growth. (submitted).

Musch MW, Walsh-Reitz MM, Chang EB. Roles of ZO-1, occludin, and actin in oxidant-induced barrier disruption. Am J Physiol Gastrointest Liver Physiol. 290(2);G222-31. 2006

Hou P, Araujo E, Zhao T, Zhang M, Massenburg D, Veselits M, Doyle C, Dinner AR, Clark MR. B Cell Antigen REceptor Signaling and Internalization Are Mutally Exclusive Events. PLoS Biol.; 4(7);e200 [Epub ahead of print] 2006

Gomez TS, McCarney SD, Carrizosa E, Labno CM, Comiskey EO, Nolz JC, Peimin Z, Freedman BD, Clark MR, Rawlings DJ, Billadequ DD, Burkhardt JK. HS1 functions as an essential actin-regulatory adaptor protein at the immune synapse. Immunity.24;741-52.2006

Bogusz AM, Brickley DR, Pew T, Conzen SD. A novel N-terminal hydrophobic motif mediates constitutive degradation of serum- anad glucocorticoid-induced kinase-1 by the ubiquitin-proteasome pathway. FEBS J 273(13);2913-28.2006

Xu Y, Leung CG, Lee DC, Kennedy, BK and Crispino JD. MTB, the murine homolog of condensing II subunit CAP-G2, represses transcriptin and promotes erythroid cell differentiation. Leukemia. 20;1261-9.2006

 

 

 

2005

Wu LR, Zaborina O, Zaborin A, Chang EB, Musch M, Holbrook C, Turner JR, Alverdy JC. Surgical ingury and metabolic stress enhance the virulence of the human opportunistic pathogen Psuedomonas aeruginosa. Surg Infect (Larchmt). 6(2);185-95.2005

2004
Jiankun Tong, Eric J. Allenspach, Stephenie M. Takahashi, Purvi D. Mody, Chan Park, Janis K. Burkhardt, and Anne Sperling.   CD43 Regulation of T Cell Activation Is Not through Steric Inhibition of T Cell-APC Interactions but through an Intracellular Mechanism.
    J. Exp. Med. Volume 199, Number 9, May 3, 2004 1277-1283.
    http://www.jem.org/cgi/doi/10.1084/jem.20021602

2003   * Zhong, R., Wan, J., Jin, R. and Lamppa, G.K.     (2003) A pea antisense gene for the chloroplast stromal processing peptidase yields seedling lethals in Arabidopsis:  survivors show defective GFP import in vivo. Plant J. 34, 802-812.     

* Davis FJ, Gupta M, Camoretti-Mercado B, Schwartz RJ, Gupta MP.     Calcium/Calmodulin-dependent Protein Kinase Activates Serum Response Factor Transcription Activity by Its Dissociation from Histone Deacetylase, HDAC4: IMPLICATIONS IN CARDIAC MUSCLE GENE REGULATION DURING HYPERTROPHY.    J Biol Chem. 2003 May 30;278(22):20047-58. Epub 2003 Mar 26.    Department of Surgery, University of Chicago, Chicago, Illinois 60637.   

* Francesca J. Davis, Madhu Gupta, Blanca Camoretti-Mercado, Robert J. Schwartz, and Mahesh P. Gupta     Journal of Biological Chemistry Mar 2003 278: 209998200    Calcium/calmodulin-dependent protein kinase activates serum response factor transcription activity by its dissociation from histone deacetylase, HDAC4: Implications in cardiac muscle gene regulation during hypertrophy   

* Song H, Tice JD, Ismagilov RF.     Angew Chem Int Ed Engl. 2003 Feb 17;42(7):768-72.    A microfluidic system for controlling reaction networks in time.    Department of Chemistry, The University of Chicago, 5735 S. Ellis Avenue, Chicago, IL 60637   

* Li L, Guris DL, Okura M, Imamoto A.     Translocation of CrkL to focal adhesions mediates integrin-induced migration downstream of Src family kinases.    Mol Cell Biol. 2003 Apr;23(8):2883-92.    Committee on Cell Physiology and The Ben May Institute for Cancer Research and Center for Molecular Oncology, The University of Chicago, Chicago, Illinois 60637, USA.     

* Cannon JL, Burkhardt JK. The regulation of actin remodeling during T-cell-APC conjugate formation. Immunol Rev. 2002 Aug;186:90-9. Review. PMID: 12234365    

* Zeng, R., J.L. Cannon, R.T. Abraham, M. Way, A. Seth, M. Rosen and J.K. Burkhardt. SLP-76, Nck, and Vav-1 form a signaling complex that coordinates WASP recruitment and CDC42 activation at the immunological synapse.

 

2002

    * Leiming Li,1,2 Masaya Okura,1, and Akira Imamoto.

    "Focal Adhesions Require Catalytic Activity of Src Family Kinases To Mediate Integrin-Matrix Adhesion." Molecular and Cellular Biology, February 2002, p. 1203-1217, Vol. 22, No. 4 http://mcb.asm.org/cgi/content/short/22/4/1203.

    * Cullinan P., Sperling AI, Burkhardt JK. The distal pole complex: a novel membrane domain distal to the immunological synapse. Immunol Rev. 2002 Nov;189:111-22. Review. PMID: 12445269

    * Cannon JL, Burkhardt, JK. The regualtion of actin remodeling during T-cell-APC conjugate formation. Immunol Rev. 2002 186:90-9.

    * Bevis BJ, Glick BS. Corrigendum: Rapidly maturing variants of the Discosoma red fluorescent protein (DsRedP. Nat Biotechnol. 2002 20 (11):1159.

    * Bevis BJ, Hammond AT, Reinke CA, Glick BS. De novo formation of transitional ER sites and Golgi structures in Pichia pastoris. Nat Cell Biol. 2002 4 (10):750-6.

    * Siemasko K. Skaggs J, Kabak S, Williamson E. Brown BK, Song W, Clark MR. Receptor-facilitated antigen presentation requres the recruitment of B cell linger protein to Igalpha. J. Immunol. 2002 168(5):2127-38.

2001

Cover on Immunity.com

"ERM Movement During T Cell Activation"
November 2001: 15 (5)

    * Eric J. Allenspach, Patrick Cullinan, Jiankun Tong, Qizhi Tang, Amanda G. Tesciuba, Judy L. Cannon, Stephenie M. Takahashi, Renell Morgan, Janis K. Burkhardt, and Anne I. Sperling (2001)ERM-Dependent Movement of CD43 Defines a Novel Protein Complex Distal to the Immunological Synapse.Immunity 2001 15: 739-750.
    * Judy L. Cannon, Christine M. Labno, Gerra Bosco, Abhinav Seth, Mary H.K. McGavin, Katherine A. Siminovitch, Michael K. Rosen, and Janis K. Burkhardt.(2001).WASP Recruitment to the T Cell:APC Contact Site Occurs Independently of Cdc42 Activation. Immunity 2001 15: 249-259.

    * Mitra M. Wanamaker CP, Green WN. Rearrangement of nicotinic receptor alpha subunits during formation of the ligand binding sites. J Neurosci. 2001 21(9): 3000-3008.

2000

    * Bhattacharyya, A., Ear, U. S., Koller, B. H., Weichselbaum, R. R. and Bishop, D. K. (2000). The breast cancer susceptibility gene BRCA1 is required for subnuclear assembly of Rad51 and survival following treatment with the DNA cross-linking agent cisplatin. J Biol Chem 275, 23899-903.

    * Camoretti-Mercado, B., Liu, H. W., Halayko, A. J., Forsythe, S. M., Kyle, J. W., Li, B., Fu, Y., McConville, J., Kogut, P., Vieira, J. E. et al. (2000). Physiological control of smooth muscle-specific gene expression through regulated nuclear translocation of serum response factor. J Biol Chem 275, 30387-93.
    * Cheng, Y., Leung, S. and Mangoura, D. (2000). Transient suppression of cortactin ectopically induces large telencephalic neurons towards a GABAergic phenotype. J Cell Sci 113, 3161-72.

 

    * Davis, D. P., Raffen, R., Dul, J. L., Vogen, S. M., Williamson, E. K., Stevens, F. J. and Argon, Y. (2000). Inhibition of Amyloid Fiber Assembly by Both BiP and Its Target Peptide. Immunity 13, 433-442.

    * Dul, J.L., D.P. Davis, Williamson, E.K., Stevens, F.J. and Y. Argon. (2000). Hsp70 and anti-fibrillogenic peptides promote degradation and inhibit intracellular aggregation of amyloidogenic light chains. J. Cell Biol. In Press.

    * Fu Y-X, Huang G, Wang Y, and Chaplin DD. (2000). Lymphotoxin-a-dependent spleen microenvironment is required for the generation of memory B cells and for their subsequent antigen-induced activation. J.Immunol 164:2508-14.

    * Guris, D. L., Fantes, J., Tara, D., Druker, B. J., and Imamoto, A. (2001). CrkL mutant mice provide evidence for multiple neurocristopathy loci involved in DiGeorge syndrome. Nature Genet. In press.

    * Wang Y, Huang G, Wang J, Molina H, Chaplin D.D, and Fu Y-X. (2000). Antigen persistence is required for somatic mutation and affinity maturation of immunologloblin. Eur. J. Immunol. 30:2226-34.

    * Wang Y, Wang, J, Hedgeman E.O, Sun Y, Wu, Q, and Fu Y-X. (2000). Complementary effects of tumor necrosis factor and lymphotoxin for the formation of germinal center and follicular dendritic cells. J. Immunol. In Press.

1999

    * Rakhilin, S., R. C. Drisdel, D. Sagher, D. McGehee, Y. Vallejo and W. N.Green. (1999). a-Bungarotoxin receptors contain a7 subunits in two different disulfide-bonded conformations. J. Cell Biol. 146:203-218.

    * Rossanese, O.W., Soderholm, J., Bevis, B.J., Sears, I.B., O'Connor, J., Williamson, E.K., and Glick, B.S. (1999). Golgi structure correlates with transitional endoplasmic reticulum organization in Pichia pastoris and Saccharomyces cerevisiae. J. Cell Biol. 145: 69-81.

    * Sedwick, C., Jusino, L., Cannon, J., Morgan, M., Miller, J., & Burkhardt, J. (1999) TCR, LFA-1 and CD28 play unique and complementary roles in signaling T cell cytoskeletal reorganization. J. Immunol. 162:1367-1375.

    * Wu Q, Wang Y, Wang J, Hedgeman EO, Browning J, and Fu Y-X. (1999). The requirement of membrane lymphotoxin for the presence of dendritic cells in lymphoid tissues. J. Exp. Med. 190:629-38.

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